AQA · A-Level · Chemistry

    Course version: 7405 · Version from Sept 2016

    The importance of hydrogen bonding and sulfur–sulfur bonds in proteins.

    Full specification wording

    Proteins (A-level only): The importance of hydrogen bonding and sulfur–sulfur bonds in proteins.

    Two very different attractions hold a protein in shape.

    Checked against the AQA 7405 specification (opens in a new tab) on .

    • Point 2 of 7
    • 4 key terms

    Study notes

    From the checked teaching notes for this specification point.

    The idea

    Two very different attractions hold a protein in shape. A hydrogen bond forms between the δ⁺ hydrogen of an N-H and a lone pair on the δ⁻ oxygen of a C=O, or between R groups that carry -OH, -NH₂ or -COOH, as a serine R group does with an aspartic acid R group. Each one is weak, but a protein has thousands and together they hold the helix, the sheet and much of the fold. A disulfide bridge is different in kind: two cysteine R groups, each ending in -CH₂SH, are oxidised so their sulfur atoms bond directly, giving -CH₂-S-S-CH₂-. That is a covalent bond, so it is far stronger than a hydrogen bond and pins together parts of the chain that are far apart in the sequence.

    What earns the marks

    • Naming cysteine as the amino acid whose R groups form the disulfide bridge.
    • Hydrogen bonding between R groups such as those of serine and aspartic acid.
    • Stating that the disulfide bridge is the stronger interaction.
    • The reason, that a disulfide bridge is a covalent bond whereas a hydrogen bond is not.

    Common mistakes and how to put them right

    • Calling a disulfide bridge a hydrogen bond because it holds two parts of a chain together.

    • Drawing a hydrogen bond to the hydrogen atom of a C=O rather than to a lone pair on the oxygen.

    • Describing hydrogen bonds as covalent.

    • Claiming any pair of R groups can form an S-S bridge, when only cysteine has the -SH group.

    Exam tips

    • Use the data booklet to read the R groups before you decide what interaction is possible; the R group is what the mark depends on.
    • A diagram showing at least -S-S- can earn the disulfide mark on its own.

    Try the lesson

    The start of the Proteins (A-level only): The importance of hydrogen bonding and sulfur–sulfur bonds in proteins. lesson, made from checked teaching notes for this specification point.

    Have a go first

    Which type of bond holds the α-helix and β-pleated sheet shapes of a protein in place?

    Listen

    Two very different attractions hold a protein in shape. A hydrogen bond forms between the δ⁺ hydrogen of an N-H and a lone pair on the δ⁻ oxygen of a C=O, or between R groups that carry -OH, -NH₂ or -COOH, as a serine R group does with an aspartic acid R group. Each one is weak, but a protein has thousands and together they hold the helix, the sheet and much of the fold. A disulfide bridge is different in kind: two cysteine R groups, each ending in -CH₂SH, are oxidised so their sulfur atoms bond directly, giving -CH₂-S-S-CH₂-. That is a covalent bond, so it is far stronger than a hydrogen bond and pins together parts of the chain that are far apart in the sequence. A strong answer earns marks for these points. naming cysteine as the amino acid whose R groups form the disulfide bridge. hydrogen bonding between R groups such as those of serine and aspartic acid. stating that the disulfide bridge is the stronger interaction. the reason, that a disulfide bridge is a covalent bond whereas a hydrogen bond is not. Exam tip: Use the data booklet to read the R groups before you decide what interaction is possible; the R group is what the mark depends on.

    See it

    A top-down flowchart with two branches. The first branch starts with a box reading 'Hydrogen bond: δ⁺ H of N-H to lone pair on δ⁻ O of C=O', which leads to 'Hydrogen bond between R groups carrying -OH, -NH₂ or -COOH', then to 'Example: serine R group with aspartic acid R group', and finally to 'Each hydrogen bond is weak, but thousands together hold helix, sheet and fold'. The second branch starts with 'Disulfide bridge: two cysteine R groups, each ending in -CH₂SH', which leads to 'Oxidised so sulfur atoms bond directly: -CH₂-S-S-CH₂-', then to 'Covalent bond, far stronger than a hydrogen bond', and finally to 'Pins together parts of the chain far apart in the sequence'.
    It shows the two kinds of attraction that hold a protein in shape: hydrogen bonding between R groups and the stronger covalent disulfide bridge between two cysteine R groups.

    Key words

    Say what each word means before you turn the card.

    hydrogen bonding

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    disulfide bridge

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    cysteine R groups

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    covalent versus intermolecular

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    See every definition
    hydrogen bonding
    A bond forms between the δ⁺ hydrogen of an N-H and a lone pair on the δ⁻ oxygen of a C=O, or between R groups carrying -OH, -NH₂ or -COOH.
    disulfide bridge
    Two cysteine R groups, each ending in -CH₂SH, are oxidised so their sulfur atoms bond directly, giving -CH₂-S-S-CH₂-.
    cysteine R groups
    Each ends in -CH₂SH, and two of them are oxidised so their sulfur atoms bond directly.
    covalent versus intermolecular
    A disulfide bridge is a covalent bond, so it is far stronger than a hydrogen bond, which is not covalent.

    Label the diagram

    Some boxes have lost their names. Pick the right name for each number.

    The diagram again, with 3 boxes numbered instead of named. A top-down flowchart with two branches. The first branch starts with a box reading 'Hydrogen bond: δ⁺ H of N-H to lone pair on δ⁻ O of C=O', which leads to 'Hydrogen bond between R groups carrying -OH, -NH₂ or -COOH', then to 'Example: serine R group with aspartic acid R group', and finally to 'Each hydrogen bond is weak, but thousands together hold helix, sheet and fold'. The second branch starts with 'Disulfide bridge: two cysteine R groups, each ending in -CH₂SH', which leads to 'Oxidised so sulfur atoms bond directly: -CH₂-S-S-CH₂-', then to 'Covalent bond, far stronger than a hydrogen bond', and finally to 'Pins together parts of the chain far apart in the sequence'.
    • 1Box 1

    • 2Box 2

    • 3Box 3

    0 of 3 labelled

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